P3E-mCherrypA: Difference between revisions

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Created page with "== Construction Details == This template is used to display DNA sequence information in a standardized format. == Crude Map == photo showing locations of components == Sequence == * Annotated Sequence: (Genbank format) link * Full-Length Sequence with individual component sequences included: (FASTA file) link == Reference == This template is used to display DNA sequence information in a standardized format."
 
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== Construction Details ==
== Construction Details ==
This template is used to display DNA sequence information in a standardized format.
p3E-mCherrypA was made by PCR amplification of mCherry and an SV40 late polyadenylation signal from a pCS2+-based construct, using primers to add att sites, followed by a BP reaction. Sequencing finds a single base PCR error, encoding an E7D mutation in mCherry. Functional tests of Cterminal fusion proteins made with this construct show that they yield fluorescent protein.
 
The mCherry sequence includes a start codon but not a good Kozak consensus (unlike p3E-EGFP-pA, which has both).


== Crude Map ==
== Crude Map ==
photo showing locations of components
Screenshot from Sequencher showing locations of components:
 
P3E-mCherrypA.png
== Sequence ==
* Annotated Sequence: (Genbank format)
link
 
* Full-Length Sequence with individual component sequences included: (FASTA file)
link
 


== Reference ==
==Download the Sequence ==
This template is used to display DNA sequence information in a standardized format.
* '''Annotated Sequence'''(Genbank format) and '''Full-Length Sequence with individual component sequences included'''(FASTA file)
: [[Media:388.p3E-mCherrypA.zip|Download p3E-mCherrypA]]

Revision as of 16:31, 13 March 2025

Construction Details

p3E-mCherrypA was made by PCR amplification of mCherry and an SV40 late polyadenylation signal from a pCS2+-based construct, using primers to add att sites, followed by a BP reaction. Sequencing finds a single base PCR error, encoding an E7D mutation in mCherry. Functional tests of Cterminal fusion proteins made with this construct show that they yield fluorescent protein.

The mCherry sequence includes a start codon but not a good Kozak consensus (unlike p3E-EGFP-pA, which has both).

Crude Map

Screenshot from Sequencher showing locations of components: P3E-mCherrypA.png

Download the Sequence

  • Annotated Sequence(Genbank format) and Full-Length Sequence with individual component sequences included(FASTA file)
Download p3E-mCherrypA