P5E-hsp70l: Difference between revisions

From tol2kit for kwan lab
Jump to navigation Jump to search
No edit summary
No edit summary
 
(One intermediate revision by one other user not shown)
Line 5: Line 5:


== Crude Map ==
== Crude Map ==
Screenshot from Sequencher showing locations of components:
Screenshot from ApE showing locations of components:
P5E-hsp70.png
 
:[[File:222 p5E-hsp70.PNG|thumb|none|350px|222 p5E-hsp70]]


==Download the Sequence ==
==Download the Sequence ==
* '''Annotated Sequence'''(Genbank format) and '''Full-Length Sequence with individual component sequences included'''(FASTA file)
* '''Annotated Sequence'''(Genbank format) and '''Full-Length Sequence with individual component sequences included'''(FASTA file)
: [[Media:222.p5E-hsp70l.zip|Download p5E-''hsp70l'']]
: [[Media:222.p5E-hsp70l.zip|Download p5E-''hsp70l'']]

Latest revision as of 19:54, 29 May 2025

Construction Details

p5E-hsp70l was made by PCR amplification of the 1.5 kb hsp70l promoter (Genbank AF158020), using primers to add att sites, followed by a BP reaction. Note that hsp70l is the official ZFIN gene name for the gene originally named hsp70 by Halloran et al., 2000. Thanks to Ceri van Slyke of ZFIN for pointing this out.

Sequencing shows a single base mutation in the hsp70l promoter (T1068G), but this does not appear to be a critical base as constructs made with this clone show normal induction by heatshock.

Crude Map

Screenshot from ApE showing locations of components:

222 p5E-hsp70

Download the Sequence

  • Annotated Sequence(Genbank format) and Full-Length Sequence with individual component sequences included(FASTA file)
Download p5E-hsp70l